feat (patient): upload done
This commit is contained in:
@@ -1,13 +1,16 @@
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package patient
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import (
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"mime/multipart"
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"time"
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ecore "simrs-vx/internal/domain/base-entities/core"
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ep "simrs-vx/internal/domain/main-entities/person"
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epa "simrs-vx/internal/domain/main-entities/person-address"
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epc "simrs-vx/internal/domain/main-entities/person-contact"
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epr "simrs-vx/internal/domain/main-entities/person-relative"
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erc "simrs-vx/internal/domain/references/common"
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"time"
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ere "simrs-vx/internal/domain/references/encounter"
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)
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type CreateDto struct {
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@@ -56,6 +59,17 @@ type SearchDto struct {
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Search string `json:"search"`
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}
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type UploadDto struct {
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Id uint `json:"-"`
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Code ere.UploadCode `json:"-"`
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File multipart.File `json:"-"`
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FileHeader *multipart.FileHeader `json:"-"`
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Filename string `json:"-"`
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Size int64 `json:"-"`
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MimeType string `json:"-"`
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MedRecNumber string `json:"-"`
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}
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type MetaDto struct {
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PageNumber int `json:"page_number"`
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PageSize int `json:"page_size"`
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@@ -85,3 +85,12 @@ func (ec EncounterClassCode) Code() string {
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return "UNKNOWN"
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}
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}
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func IsValidUploadCode(code UploadCode) bool {
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switch UploadCode(code) {
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case UCPRN, UCPDL, UCPP, UCPFC, UCMIR:
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return true
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default:
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return false
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}
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}
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@@ -2,9 +2,6 @@ package minio
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import (
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"errors"
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"io"
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"net/url"
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"time"
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a "github.com/karincake/apem"
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lo "github.com/karincake/apem/loggero"
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@@ -24,28 +21,6 @@ type MinioCfg struct {
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BucketName []string `yaml:"bucketName"`
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}
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type UploadReaderInput struct {
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File io.Reader
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Name string
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Size int64
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ContentType string
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BucketName string
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}
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type UploadPathInput struct {
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BucketName string
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ContentType string
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Name string
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Path string
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}
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type PresignedGetInput struct {
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Bucket string
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Object string
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Expiry time.Duration
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ReqParams url.Values
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}
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type ResponsePostPolicy struct {
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Url string `json:"url"`
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FormData map[string]string `json:"form-data"`
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@@ -235,6 +235,7 @@ func SetRoutes() http.Handler {
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"PATCH /{id}": patient.O.Update,
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"DELETE /{id}": patient.O.Delete,
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"GET /by-identifier": patient.O.Search,
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"POST /{id}/upload": patient.O.Upload,
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})
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/******************** sources ********************/
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@@ -10,6 +10,8 @@ import (
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e "simrs-vx/internal/domain/main-entities/patient"
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u "simrs-vx/internal/use-case/main-use-case/patient"
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ere "simrs-vx/internal/domain/references/encounter"
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)
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type myBase struct{}
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@@ -76,3 +78,37 @@ func (obj myBase) Search(w http.ResponseWriter, r *http.Request) {
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res, err := u.Search(dto)
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rw.DataResponse(w, res, err)
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}
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func (obj myBase) Upload(w http.ResponseWriter, r *http.Request) {
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id := rw.ValidateInt(w, "id", r.PathValue("id"))
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if id <= 0 {
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return
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}
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err := r.ParseMultipartForm(10 << 20) // 10 MB
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if err != nil {
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rw.DataResponse(w, nil, err)
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return
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}
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code := r.FormValue("code")
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file, header, err := r.FormFile("content")
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if err != nil {
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rw.DataResponse(w, nil, err)
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return
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}
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defer file.Close()
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dto := e.UploadDto{}
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dto.Id = uint(id)
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dto.Code = ere.UploadCode(code)
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dto.File = file
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dto.FileHeader = header
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dto.Filename = header.Filename
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dto.Size = header.Size
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dto.MimeType = header.Header.Get("Content-Type")
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res, err := u.Upload(dto)
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rw.DataResponse(w, res, err)
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}
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@@ -1,6 +1,7 @@
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package patient
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import (
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"errors"
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"strconv"
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e "simrs-vx/internal/domain/main-entities/patient"
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@@ -10,6 +11,8 @@ import (
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upc "simrs-vx/internal/use-case/main-use-case/person-contact"
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upr "simrs-vx/internal/use-case/main-use-case/person-relative"
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ere "simrs-vx/internal/domain/references/encounter"
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pl "simrs-vx/pkg/logger"
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pu "simrs-vx/pkg/use-case-helper"
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@@ -359,3 +362,73 @@ func Search(input e.SearchDto) (*d.Data, error) {
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Data: data.ToResponse(),
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}, nil
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}
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func Upload(input e.UploadDto) (*d.Data, error) {
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rdDto := e.ReadDetailDto{Id: uint16(input.Id)}
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var data *e.Patient
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var err error
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event := pl.Event{
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Feature: "Upload",
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Source: source,
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}
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// Start log
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pl.SetLogInfo(&event, input, "started", "upload")
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err = dg.I.Transaction(func(tx *gorm.DB) error {
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if !ere.IsValidUploadCode(input.Code) {
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return errors.New("invalid upload code")
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}
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pl.SetLogInfo(&event, rdDto, "started", "DBReadDetail")
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if data, err = ReadDetailData(rdDto, &event, tx); err != nil {
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return err
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}
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if data.Person == nil {
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return errors.New("person not found")
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}
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person := data.Person
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input.MedRecNumber = *data.Number
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pubUrl, err := uploadAndGenerateFileUrl(input, &event)
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if err != nil {
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event.Action = ""
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}
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switch input.Code {
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case ere.UCPRN:
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person.ResidentIdentityFileUrl = &pubUrl
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case ere.UCPDL:
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person.DrivingLicenseFileUrl = &pubUrl
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case ere.UCPP:
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person.PassportFileUrl = &pubUrl
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case ere.UCPFC:
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person.FamilyIdentityFileUrl = &pubUrl
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default:
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return errors.New("invalid upload code")
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}
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if err := tx.Save(&person).Error; err != nil {
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return err
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}
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pl.SetLogInfo(&event, nil, "complete")
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return nil
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})
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if err != nil {
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return nil, err
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}
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return &d.Data{
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Meta: d.IS{
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"source": source,
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"structure": "single-data",
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"status": "uploaded",
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},
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Data: data.ToResponse(),
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}, nil
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}
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@@ -6,8 +6,16 @@ package patient
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import (
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"fmt"
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e "simrs-vx/internal/domain/main-entities/patient"
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"path/filepath"
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"strconv"
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"strings"
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"time"
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e "simrs-vx/internal/domain/main-entities/patient"
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pl "simrs-vx/pkg/logger"
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pmh "simrs-vx/pkg/minio-helper"
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puh "simrs-vx/pkg/upload-helper"
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dg "github.com/karincake/apem/db-gorm-pg"
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)
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@@ -81,3 +89,33 @@ func GenerateNextMedicalRecordNumber() (string, error) {
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return fmt.Sprintf(format, nextInt), nil
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}
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func uploadAndGenerateFileUrl(input e.UploadDto, event *pl.Event) (string, error) {
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pl.SetLogInfo(event, input, "started", "uploadAndGenerateFileUrl")
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bucket := string(input.Code)
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ext := strings.ToLower(filepath.Ext(input.Filename))
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if !puh.IsValidFileType(ext, bucket) {
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return "", fmt.Errorf("invalid file type: %s", input.Filename)
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}
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objectName := fmt.Sprintf("%s%d%s", input.MedRecNumber, time.Now().UnixNano(), ext)
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uploadInput := pmh.UploadReaderInput{
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BucketName: bucket,
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Name: objectName,
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File: input.File,
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Size: input.Size,
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ContentType: input.MimeType,
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}
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_, err := pmh.I.PutObject(uploadInput)
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if err != nil {
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return "", err
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}
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// Build URL for access
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publicUrl := pmh.I.GenerateUrl(bucket, objectName)
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pl.SetLogInfo(event, nil, "complete")
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return publicUrl, nil
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}
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@@ -27,17 +27,35 @@ func (repo *minioRepository) createBucket(bucketName string, region string) erro
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if err != nil {
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return err
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}
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if exist {
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return nil
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}
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if err := repo.client.MakeBucket(context.Background(), bucketName, minio.MakeBucketOptions{Region: region, ObjectLocking: true}); err != nil {
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return err
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if !exist {
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// create bucket
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if err := repo.client.MakeBucket(context.Background(), bucketName, minio.MakeBucketOptions{Region: region}); err != nil {
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return err
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}
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// set bucket policy to public read
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policy := fmt.Sprintf(`{
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"Version": "2012-10-17",
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"Statement": [
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{
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"Effect": "Allow",
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"Principal": {"AWS": ["*"]},
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"Action": ["s3:GetObject"],
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"Resource": ["arn:aws:s3:::%s/*"]
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}
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]
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}`, bucketName)
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if err := repo.client.SetBucketPolicy(context.Background(), bucketName, policy); err != nil {
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return err
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}
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}
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return nil
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}
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// Upload file reader to MinIO
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func (repo *minioRepository) PutObject(input m.UploadReaderInput) (*minio.UploadInfo, error) {
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func (repo *minioRepository) PutObject(input UploadReaderInput) (*minio.UploadInfo, error) {
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if err := repo.createBucket(input.BucketName, m.O.GetRegion()); err != nil {
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return nil, err
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}
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@@ -55,7 +73,7 @@ func (repo *minioRepository) PutObject(input m.UploadReaderInput) (*minio.Upload
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}
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// Upload file path to MinIO
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func (repo *minioRepository) FPutObject(input m.UploadPathInput) (*minio.UploadInfo, error) {
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func (repo *minioRepository) FPutObject(input UploadPathInput) (*minio.UploadInfo, error) {
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if err := repo.createBucket(input.BucketName, m.O.GetRegion()); err != nil {
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return nil, err
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}
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@@ -120,7 +138,7 @@ func (repo *minioRepository) GeneratePresignedPost(policy *minio.PostPolicy) (*u
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}
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// create presigned url to get object
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func (repo *minioRepository) GeneratePresignedGetObject(input m.PresignedGetInput) (*url.URL, error) {
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func (repo *minioRepository) GeneratePresignedGetObject(input PresignedGetInput) (*url.URL, error) {
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presignedUrl, err := repo.client.PresignedGetObject(context.Background(), input.Bucket, input.Object, input.Expiry, input.ReqParams)
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if err != nil {
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return nil, err
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@@ -0,0 +1,29 @@
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package miniohelper
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import (
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"io"
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"net/url"
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"time"
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)
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type UploadReaderInput struct {
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File io.Reader
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Name string
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Size int64
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ContentType string
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BucketName string
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}
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type UploadPathInput struct {
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BucketName string
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ContentType string
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Name string
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Path string
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}
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type PresignedGetInput struct {
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Bucket string
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Object string
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Expiry time.Duration
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ReqParams url.Values
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}
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@@ -38,9 +38,8 @@ func getValidFileTypesForBucket(bucketName string) []string {
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}
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// isValidFileType checks if the uploaded file type is allowed for the specific bucket
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func isValidFileType(filename, bucketName string) bool {
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func IsValidFileType(ext, bucketName string) bool {
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allowedTypes := getValidFileTypesForBucket(bucketName)
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ext := strings.ToLower(filepath.Ext(filename))
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for _, allowedExt := range allowedTypes {
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if ext == allowedExt {
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Reference in New Issue
Block a user